Genome assembly preprints

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Preprint Authors Date Altmetric Reviews & Comments Actions
Scalable De Novo Genome Assembly Using Pregel. D. Yan, J. C. . H. C. . Z. C. . B. Shao 16th Jan 2018 1
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Assembly of Long Error-Prone Reads Using Repeat Graphs M. Kolmogorov...
P. Pevzner
12th Jan 2018 NA
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Whole body transcriptomes and new insights into the biology of the tick Ixodes ricinus P. N. Charrier...
C. Rispe
9th Jan 2018 NA
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Improved Aedes aegypti mosquito reference genome assembly enables biological discovery and vector control B. J. Matthews...
Sha
Dec 2017 NA
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DeepSimulator: a deep simulator for Nanopore sequencing Y. Li...
X. Gao
Dec 2017 NA
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The structure of the influenza A virus genome B. Dadonaite...
D. L. Bauer
Dec 2017 NA
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Leishmania naiffi and Leishmania guyanensis reference genomes highlight genome structure and gene content evolution in the Viannia subgenus S. Coughlan...
T. Downing
Dec 2017 NA
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Hercules: a profile HMM-based hybrid error correction algorithm for long reads C. Firtina...
A. E. Cicek
Dec 2017 NA
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Accelerating K-mer Frequency Counting with GPU and Non-Volatile Memory. N. Cadenelli, D. C. . J. Polo Dec 2017 9
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Outbreak of invasive wound mucormycosis in a burn unit due to multiple strains of Mucor circinelloides f. circinelloides resolved by whole genome sequencing D. Garcia-Hermoso...
A. Alanio
Dec 2017 NA
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Global optimization approach for circular and chloroplast genome assembly S. Francois...
H. Djidjev
Dec 2017 NA
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Resolving the Full Spectrum of Human Genome Variation using Linked-Reads P. Marks...
D. M. Church
Dec 2017 NA
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Botulinum-neurotoxin-like sequences identified from an Enterococcus sp. genome assembly C. H. Williamson...
J. W. Sahl
Dec 2017 NA
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Genetic architecture drives seasonal onset of hibernation in the 13-lined ground squirrel K. R. Grabek...
C. D. Bustamante
Dec 2017 20 Reviews
Comments
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Improving the annotation of the Heterorhabditis bacteriophora genome F. Mclean...
M. Blaxter
Nov 2017 NA
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Reconstructing phylogeny from reduced-representation genome sequencing data without assembly or alignment H. Fan, A. R. Ives, Y. Surget-Groba Nov 2017 NA
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Nanopore Sequencing Technology and Tools: Computational Analysis of the Current State, Bottlenecks, and Future Directions. D. S. Cali, S. G. . J. S. K. . C. A. . O. Mutlu Nov 2017 24
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Whole genome hybrid assembly and protein-coding gene annotation of the entirely black native Korean chicken breed Yeonsan Ogye J. Sohn...
H. Chae
Nov 2017 NA
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A new standard for crustacean genomes: the highly contiguous, annotated genome assembly of the clam shrimp Eulimnadia texana reveals HOX gene order and identifies the sex chromosome J. G. Baldwin-Brown, S. C. Weeks, A. D. Long Nov 2017 NA
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Pooled population resequencing of clam shrimp (Eulimnadia texana) from different vernal pools reveals signatures of local adaptation J. G. Baldwin-Brown, A. D. Long Nov 2017 NA
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