RNA-seq preprints

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Preprint Authors Date Reviews & Comments Actions
SoupX removes ambient RNA contamination from droplet based single cell RNA sequencing data M. D. Young, S. Behjati 20th Apr 2018
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LCA robustly reveals subtle diversity in large-scale single-cell RNA-seq data C. Cheng...
X. Chen
20th Apr 2018
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In silico analysis of piRNAs in retina reveals potential targets in intracellular transport and retinal degeneration S. Sivagurunathan...
S. Chidambaram
20th Apr 2018
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Transcriptome profiling by RNA-Seq reveals differentially expressed genes related to fruit development and ripening characteristics in strawberry (Fragaria × ananassa) P. Hu...
H. . Zhou
20th Apr 2018
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High-dimensional single-cell cartography reveals novel skeletal muscle resident cell populations L. Giordani...
F. L. Grand
19th Apr 2018
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ACDtool: a web-server extending the original Audic-Claverie statistical test to the comparison of large data sets of counts. J. Claverie, T. N. Ta 19th Apr 2018
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Widespread cis-regulation of RNA-editing in a large mammal T. J. Lopdell...
M. D. Littlejohn
19th Apr 2018
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TGF-{beta} induced CXCL13 in CD8+ T cells is associated with tertiary lymphoid structures in cancer H. H. Workel...
M. D. Bruyn
18th Apr 2018
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Modeling and analysis of RNA-seq data: a review from a statistical perspective. W. V. Li, J. J. Li 18th Apr 2018
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TFEA.ChIP: A tool kit for transcription factor binding site enrichment analysis capitalizing on ChIP-seq datasets L. Puente-Santamaria, L. D. Peso 18th Apr 2018
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Automated analysis of small RNA datasets with RAPID S. Karunanithi, M. Simon, M. H. Schulz 18th Apr 2018
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TGF-β induced CXCL13 in CD8+ T cells is associated with tertiary lymphoid structures in cancer H. H. Workel...
M. d. Bruyn
18th Apr 2018
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OmicsMapNet: Transforming omics data to take advantage of Deep Convolutional Neural Network for discovery. S. Ma, Z. Zhang 17th Apr 2018
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Single-Cell RNA-seq Reveals a Subpopulation of Cells Underlying {beta} Cell Expansion in the Postnatal Islets J. A. Zhang...
A. S. Peterson
17th Apr 2018
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Single cell analysis of quiescent HIV infection reveals host transcriptional profiles that regulate proviral latency T. Bradley...
E. P. Browne
17th Apr 2018
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Developmentally regulated transcription and silencing cycle of nuclear RNAi-targeted LTR retrotransposons in Caenorhabditis elegans S. G. Gu...
S. G. Mendoza
17th Apr 2018
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Heavy-tailed prior distributions for sequence count data: removing the noise and preserving large differences A. Zhu, J. G. Ibrahim, M. I. Love 17th Apr 2018
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Deciphering the evolution of vertebrate immune cell types with single-cell RNA-seq S. J. Carmona, D. Gfeller 17th Apr 2018
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Single-Cell RNA-seq Reveals a Subpopulation of Cells Underlying β Cell Expansion in the Postnatal Islets J. A. Zhang...
A. S. Peterson
17th Apr 2018
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Sparse reduced-rank regression for exploratory visualization of single cell patch-seq recordings D. Kobak, M. A. Weis, P. Berens 16th Apr 2018
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